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Intron Name: Anas_platyrhynchos_platyrhynchos_5_27038748_27040117_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27038748 - 27040117

Intron Length:

1370

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

TGGATTCTGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAGTAAA

U12 Branch Point Sequence:

GTGTCTTGGATT

Flanking Amino Acid:

YKQNIAPEQLKQLADRLATK

Intron Amino Acid Position:

1132

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.9

81.6

33.2

Major BPS

67.4

0.43

1.1

67.9

36.3

Major PPT

66.3

0.37

1.1

61.2

44.6

Minor 5ss

43.6

-0.7

2.9

58.5

40.3

Minor BPS

57.9

0.33

1.5

71.98

39.5

Associated Gene:

Gene:

PLEKHH1

Ensembl Gene ID:

ENSAPLG00000001036

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001179

27035730 - 27060673

24944