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Intron Name: Anas_platyrhynchos_platyrhynchos_5_27041317_27042816_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27041317 - 27042816

Intron Length:

1500

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTGTGC

5'SS Class:

major

3'SS Sequence:

CTCTACTTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTATAAT

U12 Branch Point Sequence:

TAATCCTCTACT

Flanking Amino Acid:

TRIVKLTYKNRLYFRSQAKG

Intron Amino Acid Position:

1037

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.4

0.48

1.1

59.4

40.4

Major BPS

75.5

0.63

1.1

34.4

Major PPT

79.1

0.66

0.8

76.9

31.4

Minor 5ss

43.2

-0.7

3.1

59.3

45.4

Minor BPS

60.8

0.42

1.9

78.78

42.8

Associated Gene:

Gene:

PLEKHH1

Ensembl Gene ID:

ENSAPLG00000001036

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001179

27035730 - 27060673

24944