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Intron Name: Anas_platyrhynchos_platyrhynchos_5_27042918_27044809_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27042918 - 27044809

Intron Length:

1892

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTTTT

5'SS Class:

strong_major

3'SS Sequence:

ATATTTTTTAAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATAATAT

U12 Branch Point Sequence:

TATTTTTTAAAG

Flanking Amino Acid:

LEHCLQGNIKICDVISKWEQ

Intron Amino Acid Position:

1004

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.9

0.92

0.9

89.8

23.7

Major BPS

58.7

0.22

1.1

55.4

Major PPT

74.4

0.55

1.1

75.2

38.1

Minor 5ss

46.2

-0.4

2.8

67.4

43.6

Minor BPS

67.6

0.41

1.4

69.32

37.9

Associated Gene:

Gene:

PLEKHH1

Ensembl Gene ID:

ENSAPLG00000001036

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001179

27035730 - 27060673

24944