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Intron Name: Anas_platyrhynchos_platyrhynchos_5_27048215_27048454_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27048215 - 27048454

Intron Length:

240

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAAGTCT

5'SS Class:

major

3'SS Sequence:

TTTATGTTCACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTTAT

U12 Branch Point Sequence:

TTTATGTTCACA

Flanking Amino Acid:

RQPQNHSVIQCWQLLALCAP

Intron Amino Acid Position:

860

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

71.5

34.3

Major BPS

78.7

0.71

1.2

71.7

44.6

Major PPT

81.5

0.71

0.9

75.9

37.9

Minor 5ss

33.3

-1.9

3.4

47.6

Minor BPS

48.6

-0.1

2.4

71.25

41.2

Associated Gene:

Gene:

PLEKHH1

Ensembl Gene ID:

ENSAPLG00000001036

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001179

27035730 - 27060673

24944