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Intron Name: Anas_platyrhynchos_platyrhynchos_5_27051583_27052283_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27051583 - 27052283

Intron Length:

701

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAATAC

5'SS Class:

strong_major

3'SS Sequence:

GTCCTCTGTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAA

U12 Branch Point Sequence:

TCCTCTGTATAG

Flanking Amino Acid:

KPTVKGWLTKVKHGHSKLVW

Intron Amino Acid Position:

640

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

74.5

29.8

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

69.7

0.44

0.9

64.5

36.6

Minor 5ss

37.6

-1.4

3.2

49.9

46.6

Minor BPS

42.2

-0.7

2.3

47.46

46.1

Associated Gene:

Gene:

PLEKHH1

Ensembl Gene ID:

ENSAPLG00000001036

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001179

27035730 - 27060673

24944