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Intron Name: Anas_platyrhynchos_platyrhynchos_5_27054066_27054619_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27054066 - 27054619

Intron Length:

554

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGTCTT

5'SS Class:

major

3'SS Sequence:

CTTTGCCCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGATAAC

U12 Branch Point Sequence:

TGCAAGATAACT

Flanking Amino Acid:

SYSTDGGICTESMEKSGYLL

Intron Amino Acid Position:

520

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.61

1.1

75.1

40.8

Major BPS

53.9

0.1

1.2

55.8

37.4

Major PPT

79.7

0.67

0.8

70.1

36.5

Minor 5ss

43.1

-0.8

3.2

69.3

40.9

Minor BPS

42.8

-0.4

2.4

63.66

45.7

Associated Gene:

Gene:

PLEKHH1

Ensembl Gene ID:

ENSAPLG00000001036

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001179

27035730 - 27060673

24944