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Intron Name: Anas_platyrhynchos_platyrhynchos_5_27054760_27055742_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27054760 - 27055742

Intron Length:

983

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAGTGG

5'SS Class:

major

3'SS Sequence:

TCATTTTGAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TCATTTTGAACA

Flanking Amino Acid:

MPGSPRAVKRGVSMSSLSSE

Intron Amino Acid Position:

473

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

63.7

43.1

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

71.9

0.49

69.2

40.5

Minor 5ss

35.5

-1.6

3.3

46.8

48.5

Minor BPS

62.4

0.39

1.4

68.34

38.2

Associated Gene:

Gene:

PLEKHH1

Ensembl Gene ID:

ENSAPLG00000001036

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001179

27035730 - 27060673

24944