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Intron Name: Anas_platyrhynchos_platyrhynchos_5_27056499_27057153_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27056499 - 27057153

Intron Length:

655

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGTTCT

5'SS Class:

major

3'SS Sequence:

TGAATTTTCCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAA

U12 Branch Point Sequence:

TCTCTCTGAATT

Flanking Amino Acid:

AAAVNDASSCFSNFSRSASG

Intron Amino Acid Position:

393

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.61

1.1

74.8

Major BPS

69.8

0.49

37.5

Major PPT

73.8

0.54

65.4

45.1

Minor 5ss

45.8

-0.4

2.8

69.7

40.4

Minor BPS

64.5

0.53

1.4

77.82

38.8

Associated Gene:

Gene:

PLEKHH1

Ensembl Gene ID:

ENSAPLG00000001036

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001179

27035730 - 27060673

24944