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Intron Name: Anas_platyrhynchos_platyrhynchos_5_27107567_27117965_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27107567 - 27117965

Intron Length:

10399

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGGCGA

5'SS Class:

major

3'SS Sequence:

TGCTTTGCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAA

U12 Branch Point Sequence:

TGAAATAAAACT

Flanking Amino Acid:

PPAAGRPWSPEGCLLGVLAV

Intron Amino Acid Position:

157

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.7

0.56

43.6

Major BPS

0.3

62.3

30.4

Major PPT

73.5

0.53

0.9

65.8

Minor 5ss

25.2

-2.9

3.1

30.2

42.9

Minor BPS

42.7

-0.4

60.57

42.4

Associated Gene:

Gene:

RAD51B

Ensembl Gene ID:

ENSAPLG00000002285

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047114

27107099 - 27469794

362696

ENSAPLT00000040960

27107099 - 27531051

423953