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Intron Name: Anas_platyrhynchos_platyrhynchos_5_27153612_27156749_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

27153612 - 27156749

Intron Length:

3138

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTTTGCTC

5'SS Class:

weak_major

3'SS Sequence:

TTTTGCCCTGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAA

U12 Branch Point Sequence:

TTCTCAAAAACT

Flanking Amino Acid:

IRISSCTLQIRLGSMAAKKL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.7

0.21

1.2

54.4

42.4

Major BPS

85.7

0.89

0.8

85.9

22.5

Major PPT

80.1

0.68

0.8

74.7

30.5

Minor 5ss

37.8

-1.4

3.2

51.4

45.3

Minor BPS

49.9

0.07

2.2

78.09

43.9

Associated Gene:

Gene:

RAD51B

Ensembl Gene ID:

ENSAPLG00000002285

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043278

27153427 - 27469794

316368

ENSAPLT00000021414

27145405 - 27531051

385647