Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27156844 - 27157611

Intron Length:

768

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAAAAGG

5'SS Class:

major

3'SS Sequence:

TATCTTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTTAT

U12 Branch Point Sequence:

GGTCTCTGAACC

Flanking Amino Acid:

LSRYQITTCQDFLCLSLLEL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

64.9

Major BPS

78.7

0.71

1.2

71.7

44.6

Major PPT

87.4

0.84

0.7

85.1

29.2

Minor 5ss

26.8

-2.7

2.8

31.3

42.4

Minor BPS

59.9

0.29

1.5

66.57

38.1

Associated Gene:

Gene:

RAD51B

Ensembl Gene ID:

ENSAPLG00000002285

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030286

27156750 - 27573311

416562

ENSAPLT00000040960

27107099 - 27531051

423953

ENSAPLT00000047114

27107099 - 27469794

362696

ENSAPLT00000021414

27145405 - 27531051

385647

ENSAPLT00000040580

27156750 - 27249182

92433

ENSAPLT00000044488

27111877 - 27469794

357918

ENSAPLT00000002294

27156750 - 27192214

35465

ENSAPLT00000037718

27156750 - 27425848

269099

ENSAPLT00000032799

27155203 - 27531051

375849

ENSAPLT00000043278

27153427 - 27469794

316368

Intron Name: Anas_platyrhynchos_platyrhynchos_5_27156844_27157611_F

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: