Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27157726 - 27159369

Intron Length:

1644

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGTTTG

5'SS Class:

major

3'SS Sequence:

TCTCCTGTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

ACCTTTTCAATC

Flanking Amino Acid:

SLACAPKMQTAYEMKVRRSV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

72.9

39.3

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

77.4

0.62

0.8

72.7

Minor 5ss

-0.4

2.8

63.9

41.4

Minor BPS

50.7

1.5

55.58

37.8

Associated Gene:

Gene:

RAD51B

Ensembl Gene ID:

ENSAPLG00000002285

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030286

27156750 - 27573311

416562

ENSAPLT00000040960

27107099 - 27531051

423953

ENSAPLT00000021414

27145405 - 27531051

385647

ENSAPLT00000040580

27156750 - 27249182

92433

ENSAPLT00000047114

27107099 - 27469794

362696

ENSAPLT00000002294

27156750 - 27192214

35465

ENSAPLT00000037718

27156750 - 27425848

269099

ENSAPLT00000044488

27111877 - 27469794

357918

ENSAPLT00000032799

27155203 - 27531051

375849

ENSAPLT00000043278

27153427 - 27469794

316368

Intron Name: Anas_platyrhynchos_platyrhynchos_5_27157726_27159369_F

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: