Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27164959 - 27169591

Intron Length:

4633

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGATGC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTGATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAG

U12 Branch Point Sequence:

TTTTTTTTGATA

Flanking Amino Acid:

IDTESAFSAERLVEIAGNRF

Intron Amino Acid Position:

151

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.1

0.95

0.8

75.9

34.8

Major BPS

0.65

1.5

85.7

34.9

Major PPT

84.9

0.78

0.8

84.2

30.9

Minor 5ss

38.3

-1.3

3.1

50.9

45.7

Minor BPS

74.5

0.76

81.02

27.4

Associated Gene:

Gene:

RAD51B

Ensembl Gene ID:

ENSAPLG00000002285

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021414

27145405 - 27531051

385647

ENSAPLT00000040580

27156750 - 27249182

92433

ENSAPLT00000047114

27107099 - 27469794

362696

ENSAPLT00000002294

27156750 - 27192214

35465

ENSAPLT00000037718

27156750 - 27425848

269099

ENSAPLT00000044488

27111877 - 27469794

357918

ENSAPLT00000032799

27155203 - 27531051

375849

ENSAPLT00000043278

27153427 - 27469794

316368

ENSAPLT00000030286

27156750 - 27573311

416562

ENSAPLT00000040960

27107099 - 27531051

423953

Intron Name: Anas_platyrhynchos_platyrhynchos_5_27164959_27169591_F

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: