Gene Search

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

27169712 - 27170505

Intron Length:

794

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATTCTTT

5'SS Class:

weak_major

3'SS Sequence:

TTTGCTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATATAT

U12 Branch Point Sequence:

ATAGGTATAAGT

Flanking Amino Acid:

RELTCDSVLKRIKSLEEEII

Intron Amino Acid Position:

191

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.57

73.3

38.2

Major BPS

71.4

0.53

67.3

39.3

Major PPT

86.1

0.81

0.7

85.1

29.7

Minor 5ss

70.8

0.7

2.2

82.3

37.4

Minor BPS

41.7

-0.5

2.2

59.51

Associated Gene:

Gene:

RAD51B

Ensembl Gene ID:

ENSAPLG00000002285

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030286

27156750 - 27573311

416562

ENSAPLT00000040960

27107099 - 27531051

423953

ENSAPLT00000021414

27145405 - 27531051

385647

ENSAPLT00000040580

27156750 - 27249182

92433

ENSAPLT00000047114

27107099 - 27469794

362696

ENSAPLT00000002294

27156750 - 27192214

35465

ENSAPLT00000037718

27156750 - 27425848

269099

ENSAPLT00000044488

27111877 - 27469794

357918

ENSAPLT00000032799

27155203 - 27531051

375849

ENSAPLT00000043278

27153427 - 27469794

316368

Intron Name: Anas_platyrhynchos_platyrhynchos_5_27169712_27170505_F

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: