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Intron Name: Anas_platyrhynchos_platyrhynchos_5_27170690_27324269_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27170690 - 27324269

Intron Length:

153580

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGTTGT

5'SS Class:

major

3'SS Sequence:

TATGTGTTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTCAT

U12 Branch Point Sequence:

CTCTCCCTATGT

Flanking Amino Acid:

KYLAEEFSIPVILTNQITTS

Intron Amino Acid Position:

296

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.64

72.9

39.3

Major BPS

83.4

0.83

0.8

83.7

25.7

Major PPT

79.7

0.67

0.9

73.2

41.7

Minor 5ss

44.1

-0.6

2.9

63.9

41.5

Minor BPS

-0.1

2.2

68.01

48.5

Associated Gene:

Gene:

RAD51B

Ensembl Gene ID:

ENSAPLG00000002285

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032799

27155203 - 27531051

375849

ENSAPLT00000044488

27111877 - 27469794

357918

ENSAPLT00000030286

27156750 - 27573311

416562

ENSAPLT00000043278

27153427 - 27469794

316368

ENSAPLT00000021414

27145405 - 27531051

385647

ENSAPLT00000040960

27107099 - 27531051

423953

ENSAPLT00000037718

27156750 - 27425848

269099

ENSAPLT00000047114

27107099 - 27469794

362696