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Intron Name: Anas_platyrhynchos_platyrhynchos_5_2736040_2736777_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2736040 - 2736777

Intron Length:

738

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTAAGGACA

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTGATACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

CCCTTTTTGATA

Flanking Amino Acid:

DCFACQLCNQRQPAWSKTEP

Intron Amino Acid Position:

121

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

72.7

38.3

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

81.1

0.7

0.9

76.3

36.9

Minor 5ss

-1.9

3.1

41.9

44.5

Minor BPS

54.6

0.14

1.2

56.05

38.4

Associated Gene:

Gene:

LMO1

Ensembl Gene ID:

ENSAPLG00000029620

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042291

2685522 - 2737847

52326