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Intron Name: Anas_platyrhynchos_platyrhynchos_5_27383162_27407587_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27383162 - 27407587

Intron Length:

24426

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAACC

5'SS Class:

strong_major

3'SS Sequence:

GTTTGTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTTAT

U12 Branch Point Sequence:

ATGTACTTATAC

Flanking Amino Acid:

LQYHELPTRQILVAKSPVAP

Intron Amino Acid Position:

370

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.4

0.88

0.8

77.7

30.1

Major BPS

83.6

0.84

0.8

71.9

35.8

Major PPT

86.2

0.81

0.8

80.6

Minor 5ss

29.3

-2.4

2.8

35.3

40.9

Minor BPS

49.9

-0

1.9

63.3

41.7

Associated Gene:

Gene:

RAD51B

Ensembl Gene ID:

ENSAPLG00000002285

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030286

27156750 - 27573311

416562

ENSAPLT00000043278

27153427 - 27469794

316368

ENSAPLT00000021414

27145405 - 27531051

385647

ENSAPLT00000040960

27107099 - 27531051

423953

ENSAPLT00000037718

27156750 - 27425848

269099

ENSAPLT00000047114

27107099 - 27469794

362696

ENSAPLT00000032799

27155203 - 27531051

375849

ENSAPLT00000044488

27111877 - 27469794

357918