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Intron Name: Anas_platyrhynchos_platyrhynchos_5_27407669_27425731_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27407669 - 27425731

Intron Length:

18063

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGATCA

5'SS Class:

strong_major

3'SS Sequence:

CATTCCTCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTGAT

U12 Branch Point Sequence:

ATTGATCTAACT

Flanking Amino Acid:

PLRNQAWFFKKQTVNCLIEE

Intron Amino Acid Position:

354

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

71.4

35.1

Major BPS

79.8

0.74

0.9

69.4

37.7

Major PPT

74.7

0.56

0.8

65.8

35.6

Minor 5ss

36.8

-1.5

3.3

48.1

47.6

Minor BPS

52.1

0.14

1.9

76.02

40.5

Associated Gene:

Gene:

RAD51B

Ensembl Gene ID:

ENSAPLG00000002285

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037718

27156750 - 27425848

269099