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Intron Name: Anas_platyrhynchos_platyrhynchos_5_27407669_27469683_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27407669 - 27469683

Intron Length:

62015

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGATCA

5'SS Class:

strong_major

3'SS Sequence:

TTGCTCTTGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTGAA

U12 Branch Point Sequence:

TTGCTCTTGACA

Flanking Amino Acid:

PLRNQAWFFKALESIQLSSW

Intron Amino Acid Position:

354

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

71.4

35.1

Major BPS

73.3

0.58

0.9

63.4

35.6

Major PPT

75.7

0.58

72.3

37.9

Minor 5ss

36.8

-1.5

3.3

48.1

47.6

Minor BPS

70.5

0.64

1.2

75.39

35.8

Associated Gene:

Gene:

RAD51B

Ensembl Gene ID:

ENSAPLG00000002285

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044488

27111877 - 27469794

357918

ENSAPLT00000043278

27153427 - 27469794

316368

ENSAPLT00000047114

27107099 - 27469794

362696