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Intron Name: Anas_platyrhynchos_platyrhynchos_5_27407669_27573185_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27407669 - 27573185

Intron Length:

165517

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGATCA

5'SS Class:

strong_major

3'SS Sequence:

ATTTTTCACTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TTTTTCTTATGT

Flanking Amino Acid:

PLRNQAWFFKMELGNQAGWI

Intron Amino Acid Position:

354

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

71.4

35.1

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

75.5

0.57

0.8

75.1

34.3

Minor 5ss

36.8

-1.5

3.3

48.1

47.6

Minor BPS

66.5

0.6

1.9

87.15

38.9

Associated Gene:

Gene:

RAD51B

Ensembl Gene ID:

ENSAPLG00000002285

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030286

27156750 - 27573311

416562