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Intron Name: Anas_platyrhynchos_platyrhynchos_5_27622023_27625545_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27622023 - 27625545

Intron Length:

3523

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTAGT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTCTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTATAT

U12 Branch Point Sequence:

TTTTTTTTTTCT

Flanking Amino Acid:

IHLKNGFGFVEFEDHRDADD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

83.5

Major BPS

66.7

0.41

1.1

63.2

42.8

Major PPT

91.9

0.94

0.5

89.3

19.5

Minor 5ss

37.6

-1.4

2.8

48.3

42.5

Minor BPS

45.5

-0.2

3.6

82.93

38.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002469

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002493

27613065 - 27625684

12620