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Intron Name: Anas_platyrhynchos_platyrhynchos_5_27636744_27638217_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27636744 - 27638217

Intron Length:

1474

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAATGTAG

5'SS Class:

major

3'SS Sequence:

TCTTGTTCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCACAT

U12 Branch Point Sequence:

CCTGGCTCACAT

Flanking Amino Acid:

ACLISMGYNMGEAEFARIMS

Intron Amino Acid Position:

810

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.2

0.5

1.1

61.1

39.8

Major BPS

65.3

0.38

1.1

72.6

33.1

Major PPT

0.79

0.8

37.3

Minor 5ss

36.3

-1.6

3.3

43.3

45.4

Minor BPS

38.7

-0.7

2.2

52.48

48.2

Associated Gene:

Gene:

ACTN1

Ensembl Gene ID:

ENSAPLG00000002615

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036227

27634593 - 27718792

84200

ENSAPLT00000029047

27634593 - 27718792

84200

ENSAPLT00000021455

27634593 - 27718792

84200