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Intron Name: Anas_platyrhynchos_platyrhynchos_5_27638284_27638814_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27638284 - 27638814

Intron Length:

531

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTGAAT

5'SS Class:

major

3'SS Sequence:

TCACTCTCTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

CTTTGCATCACT

Flanking Amino Acid:

LGYDIGNDAQKKTGMMDCED

Intron Amino Acid Position:

788

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.5

0.53

1.1

71.7

39.6

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

74.8

0.56

0.8

69.9

30.7

Minor 5ss

32.9

-1.9

3.4

48.5

47.3

Minor BPS

48.5

-0

2.4

76.44

Associated Gene:

Gene:

ACTN1

Ensembl Gene ID:

ENSAPLG00000002615

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036227

27634593 - 27718792

84200

ENSAPLT00000021455

27634593 - 27718792

84200