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Intron Name: Anas_platyrhynchos_platyrhynchos_5_27638896_27640903_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

27638896 - 27640903

Intron Length:

2008

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTCAG

5'SS Class:

strong_major

3'SS Sequence:

ACCGCATAACCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ACTGCAT

U12 Branch Point Sequence:

CACCGCATAACC

Flanking Amino Acid:

FRASFNHFDRDHSGTLGPEE

Intron Amino Acid Position:

761

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

68.8

43.8

Major BPS

53.6

0.09

1.4

65.3

41.5

Major PPT

53.6

0.08

44.6

40.1

Minor 5ss

33.1

-1.9

2.8

41.8

Minor BPS

45.8

-0.3

53.82

43.6

Associated Gene:

Gene:

ACTN1

Ensembl Gene ID:

ENSAPLG00000002615

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002745

27633593 - 27718792

85200

ENSAPLT00000036227

27634593 - 27718792

84200

ENSAPLT00000021455

27634593 - 27718792

84200