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Intron Name: Anas_platyrhynchos_platyrhynchos_5_27643186_27644119_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27643186 - 27644119

Intron Length:

934

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTGAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTGCTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

CATGTATTAAAT

Flanking Amino Acid:

PQEINGKWEHVRQLVPRRDQ

Intron Amino Acid Position:

607

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

79.6

29.1

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

80.5

0.69

0.8

73.6

Minor 5ss

39.8

-1.1

55.2

42.1

Minor BPS

49.5

0.05

1.8

67.08

43.3

Associated Gene:

Gene:

ACTN1

Ensembl Gene ID:

ENSAPLG00000002615

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002745

27633593 - 27718792

85200

ENSAPLT00000036227

27634593 - 27718792

84200

ENSAPLT00000029047

27634593 - 27718792

84200

ENSAPLT00000021455

27634593 - 27718792

84200