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Intron Name: Anas_platyrhynchos_platyrhynchos_5_27646491_27646950_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27646491 - 27646950

Intron Length:

460

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGACAT

5'SS Class:

strong_major

3'SS Sequence:

TGTGCACGCTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTGCAC

U12 Branch Point Sequence:

TTTTTGTGCACG

Flanking Amino Acid:

LTQKRREALERTEKLLETID

Intron Amino Acid Position:

499

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.8

76.8

33.7

Major BPS

-0

1.5

63.1

44.5

Major PPT

62.8

0.29

58.8

Minor 5ss

28.2

-2.5

3.1

38.3

46.6

Minor BPS

45.3

-0.5

2.5

63.41

44.6

Associated Gene:

Gene:

ACTN1

Ensembl Gene ID:

ENSAPLG00000002615

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002745

27633593 - 27718792

85200

ENSAPLT00000036227

27634593 - 27718792

84200

ENSAPLT00000029047

27634593 - 27718792

84200

ENSAPLT00000021455

27634593 - 27718792

84200