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Intron Name: Anas_platyrhynchos_platyrhynchos_5_27649652_27650193_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27649652 - 27650193

Intron Length:

542

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAATGCC

5'SS Class:

major

3'SS Sequence:

GCTCCCTCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTCAT

U12 Branch Point Sequence:

CTGTCCTTCATT

Flanking Amino Acid:

KASIHESWTDGKEAMLQQKD

Intron Amino Acid Position:

412

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.65

68.3

Major BPS

0.62

1.1

77.2

Major PPT

72.7

0.51

0.8

69.1

31.4

Minor 5ss

33.4

-1.9

3.2

41.4

40.3

Minor BPS

0.58

1.8

79.19

43.7

Associated Gene:

Gene:

ACTN1

Ensembl Gene ID:

ENSAPLG00000002615

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021455

27634593 - 27718792

84200

ENSAPLT00000002745

27633593 - 27718792

85200

ENSAPLT00000036227

27634593 - 27718792

84200

ENSAPLT00000029047

27634593 - 27718792

84200