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Intron Name: Anas_platyrhynchos_platyrhynchos_5_27668095_27668676_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27668095 - 27668676

Intron Length:

582

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATCTC

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTCTATAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGTTAAT

U12 Branch Point Sequence:

AGTGGGTTAATT

Flanking Amino Acid:

RFAIQDISVEETSAKEGLLL

Intron Amino Acid Position:

143

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.9

78.6

35.9

Major BPS

66.6

0.41

1.4

69.7

44.2

Major PPT

88.1

0.86

0.6

84.5

23.5

Minor 5ss

38.1

-1.3

3.1

52.9

44.3

Minor BPS

45.8

-0.2

2.4

66.49

44.7

Associated Gene:

Gene:

ACTN1

Ensembl Gene ID:

ENSAPLG00000002615

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002745

27633593 - 27718792

85200

ENSAPLT00000036227

27634593 - 27718792

84200

ENSAPLT00000029047

27634593 - 27718792

84200

ENSAPLT00000021455

27634593 - 27718792

84200