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Intron Name: Anas_platyrhynchos_platyrhynchos_5_27681005_27718687_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27681005 - 27718687

Intron Length:

37683

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGCACC

5'SS Class:

major

3'SS Sequence:

TTCTGTGTTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTGAC

U12 Branch Point Sequence:

TTTTTCTTTTCT

Flanking Amino Acid:

DPAWEKQQRKTFTAWCNSHL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.6

0.6

65.8

40.2

Major BPS

73.6

0.59

0.9

63.3

35.6

Major PPT

78.5

0.64

0.9

76.8

37.4

Minor 5ss

33.8

-1.8

3.1

43.2

44.2

Minor BPS

47.9

-0

3.6

87.49

38.1

Associated Gene:

Gene:

ACTN1

Ensembl Gene ID:

ENSAPLG00000002615

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029047

27634593 - 27718792

84200

ENSAPLT00000021455

27634593 - 27718792

84200

ENSAPLT00000002745

27633593 - 27718792

85200

ENSAPLT00000036227

27634593 - 27718792

84200