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Intron Name: Anas_platyrhynchos_platyrhynchos_5_27823114_27823986_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27823114 - 27823986

Intron Length:

873

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

ACCTTTATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

TTTACCTTTATT

Flanking Amino Acid:

RPVLGIDCEWVSVEGKANPV

Intron Amino Acid Position:

135

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

68.4

38.7

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

80.3

0.68

0.8

77.5

34.8

Minor 5ss

26.1

-2.7

2.9

22.8

37.4

Minor BPS

72.5

0.79

1.6

89.05

35.4

Associated Gene:

Gene:

EXD2

Ensembl Gene ID:

ENSAPLG00000003322

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044060

27822334 - 27831288

8955

ENSAPLT00000040280

27822334 - 27831339

9006

ENSAPLT00000003401

27815261 - 27831288

16028