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Intron Name: Anas_platyrhynchos_platyrhynchos_5_27825490_27826102_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27825490 - 27826102

Intron Length:

613

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGTGTCTT

5'SS Class:

strong_major

3'SS Sequence:

TGCTTTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCCCAG

U12 Branch Point Sequence:

TTGCCAGTATCC

Flanking Amino Acid:

WEAEELTQHQVLYAARDAQI

Intron Amino Acid Position:

263

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

79.6

35.4

Major BPS

45.8

-0.2

1.6

58.2

40.4

Major PPT

85.3

0.8

80.6

31.4

Minor 5ss

40.8

-1

58.1

46.5

Minor BPS

43.8

-0.4

2.4

60.96

Associated Gene:

Gene:

EXD2

Ensembl Gene ID:

ENSAPLG00000003322

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044060

27822334 - 27831288

8955

ENSAPLT00000040280

27822334 - 27831339

9006

ENSAPLT00000003401

27815261 - 27831288

16028