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Intron Name: Anas_platyrhynchos_platyrhynchos_5_27826426_27828468_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27826426 - 27828468

Intron Length:

2043

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

CCTTGTTTCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

GTTTTTGCAATG

Flanking Amino Acid:

RKPLGVGYSARKSPLYDNCF

Intron Amino Acid Position:

370

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.8

1.06

0.8

81.8

38.5

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

80.5

0.69

0.8

74.8

33.5

Minor 5ss

37.8

-1.4

49.5

46.7

Minor BPS

45.4

-0.4

2.1

55.29

40.9

Associated Gene:

Gene:

EXD2

Ensembl Gene ID:

ENSAPLG00000003322

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040280

27822334 - 27831339

9006

ENSAPLT00000003401

27815261 - 27831288

16028

ENSAPLT00000044060

27822334 - 27831288

8955