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Intron Name: Anas_platyrhynchos_platyrhynchos_5_27828906_27829558_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27828906 - 27829558

Intron Length:

653

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGTTGC

5'SS Class:

strong_major

3'SS Sequence:

TTGTCTTCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTAAT

U12 Branch Point Sequence:

ATGTAATGAGCT

Flanking Amino Acid:

VVCGKRESYIRKNIVPHEYR

Intron Amino Acid Position:

451

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

0.9

69.6

37.9

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

80.5

0.69

0.8

73.4

37.1

Minor 5ss

35.6

-1.6

2.9

44.4

43.5

Minor BPS

44.9

-0.3

66.12

43.7

Associated Gene:

Gene:

EXD2

Ensembl Gene ID:

ENSAPLG00000003322

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003401

27815261 - 27831288

16028

ENSAPLT00000044060

27822334 - 27831288

8955

ENSAPLT00000040280

27822334 - 27831339

9006