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Intron Name: Anas_platyrhynchos_platyrhynchos_5_27887393_27889318_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27887393 - 27889318

Intron Length:

1926

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATC|GTAAGTATG

5'SS Class:

major

3'SS Sequence:

TGCCTCCCTTAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTCAT

U12 Branch Point Sequence:

GTGTGCCAAACG

Flanking Amino Acid:

IILVDDFSSDPEDCQLLTKI

Intron Amino Acid Position:

172

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.9

0.54

1.3

74.5

41.9

Major BPS

83.4

0.83

0.8

83.7

25.7

Major PPT

65.8

0.36

68.3

32.4

Minor 5ss

40.9

-1

2.8

52.1

38.9

Minor BPS

43.2

-0.6

2.3

52.54

47.7

Associated Gene:

Gene:

GALNT16

Ensembl Gene ID:

ENSAPLG00000003541

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043522

27851352 - 27914766

63415

ENSAPLT00000033161

27851352 - 27910936

59585

ENSAPLT00000003643

27851352 - 27914766

63415