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Intron Name: Anas_platyrhynchos_platyrhynchos_5_27892286_27893445_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27892286 - 27893445

Intron Length:

1160

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGTATA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACAAAA

U12 Branch Point Sequence:

TTTTTTTTCACA

Flanking Amino Acid:

YLAASADLRGGFDWSLHFKW

Intron Amino Acid Position:

264

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.9

83.2

30.8

Major BPS

51.5

0.04

0.9

57.3

24.9

Major PPT

94.4

0.5

91.2

20.6

Minor 5ss

32.5

-2

3.1

41.3

45.3

Minor BPS

69.5

0.61

1.7

82.25

33.1

Associated Gene:

Gene:

GALNT16

Ensembl Gene ID:

ENSAPLG00000003541

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043522

27851352 - 27914766

63415

ENSAPLT00000033161

27851352 - 27910936

59585

ENSAPLT00000003643

27851352 - 27914766

63415