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Intron Name: Anas_platyrhynchos_platyrhynchos_5_27893531_27894883_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27893531 - 27894883

Intron Length:

1353

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATCTGTC

5'SS Class:

major

3'SS Sequence:

TTTTCTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

CTTGTGATAATT

Flanking Amino Acid:

MSRTDPTQSIRTPVIAGGIF

Intron Amino Acid Position:

292

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.3

0.6

1.2

72.3

37.8

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

1.01

0.6

88.4

28.7

Minor 5ss

48.9

-0.1

2.9

69.7

41.2

Minor BPS

45.3

-0.2

2.3

67.5

44.1

Associated Gene:

Gene:

GALNT16

Ensembl Gene ID:

ENSAPLG00000003541

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043522

27851352 - 27914766

63415

ENSAPLT00000033161

27851352 - 27910936

59585

ENSAPLT00000003643

27851352 - 27914766

63415