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Intron Name: Anas_platyrhynchos_platyrhynchos_5_27899631_27900317_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27899631 - 27900317

Intron Length:

687

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAGGTGCT

5'SS Class:

major

3'SS Sequence:

TGTCCCCATGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAAGCAT

U12 Branch Point Sequence:

TTGTCCCCATGC

Flanking Amino Acid:

FPEGNALTYIKNTKRTAEVW

Intron Amino Acid Position:

369

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.4

0.62

72.8

35.1

Major BPS

48.7

-0

1.4

57.8

Major PPT

0.52

0.9

66.6

34.5

Minor 5ss

35.6

-1.6

3.5

49.9

40.8

Minor BPS

43.1

-0.5

2.3

59.24

45.6

Associated Gene:

Gene:

GALNT16

Ensembl Gene ID:

ENSAPLG00000003541

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043522

27851352 - 27914766

63415

ENSAPLT00000033161

27851352 - 27910936

59585

ENSAPLT00000003643

27851352 - 27914766

63415