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Intron Name: Anas_platyrhynchos_platyrhynchos_5_27901515_27902447_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27901515 - 27902447

Intron Length:

933

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTCAG

5'SS Class:

major

3'SS Sequence:

GTTTTGTTTCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTACAAT

U12 Branch Point Sequence:

AGTCCCTTACAA

Flanking Amino Acid:

WYLENVYPELKVPEKELIPG

Intron Amino Acid Position:

428

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

67.7

39.3

Major BPS

65.2

0.38

1.3

73.4

38.5

Major PPT

73.8

0.54

1.1

71.5

43.2

Minor 5ss

29.8

-2.3

2.8

32.5

35.8

Minor BPS

55.3

0.16

1.7

65.83

39.8

Associated Gene:

Gene:

GALNT16

Ensembl Gene ID:

ENSAPLG00000003541

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043522

27851352 - 27914766

63415

ENSAPLT00000033161

27851352 - 27910936

59585

ENSAPLT00000003643

27851352 - 27914766

63415