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Intron Name: Anas_platyrhynchos_platyrhynchos_5_27902590_27903947_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27902590 - 27903947

Intron Length:

1358

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGTGG

5'SS Class:

strong_major

3'SS Sequence:

TCTTATGCCAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TCTTTCTTATGC

Flanking Amino Acid:

GTVNNPPVTQEWVFSDPLIR

Intron Amino Acid Position:

476

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

70.4

42.5

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

0.29

1.1

63.1

37.2

Minor 5ss

36.1

-1.6

3.3

46.8

48.5

Minor BPS

57.1

0.2

1.9

69.18

42.9

Associated Gene:

Gene:

GALNT16

Ensembl Gene ID:

ENSAPLG00000003541

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043522

27851352 - 27914766

63415

ENSAPLT00000033161

27851352 - 27910936

59585

ENSAPLT00000003643

27851352 - 27914766

63415