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Intron Name: Anas_platyrhynchos_platyrhynchos_5_27911788_27914067_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

3UTR

Intron Coordinates:

27911788 - 27914067

Intron Length:

2280

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAGCACAG

5'SS Class:

weak_major

3'SS Sequence:

GCTCCTCCACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTCAC

U12 Branch Point Sequence:

TTGCAGCTAACA

Flanking Amino Acid:

3UTR

Intron Amino Acid Position:

3UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.3

0.17

1.2

46.1

43.9

Major BPS

76.2

0.65

0.9

77.4

26.5

Major PPT

67.4

0.39

0.9

59.2

36.9

Minor 5ss

35.6

-1.6

3.4

43.7

45.9

Minor BPS

44.3

-0.4

2.4

62.76

42.9

Associated Gene:

Gene:

GALNT16

Ensembl Gene ID:

ENSAPLG00000003541

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003643

27851352 - 27914766

63415