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Intron Name: Anas_platyrhynchos_platyrhynchos_5_27948784_27951180_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27948784 - 27951180

Intron Length:

2397

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTCAA

5'SS Class:

strong_major

3'SS Sequence:

ATTTTTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

TTACCAGTAAAT

Flanking Amino Acid:

IVFVAIMLHKAPAAFGLVSF

Intron Amino Acid Position:

185

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.1

1.06

0.7

83.2

30.8

Major BPS

73.1

0.58

79.6

29.1

Major PPT

0.97

0.7

88.8

27.4

Minor 5ss

33.5

-1.9

2.9

40.7

45.5

Minor BPS

47.5

-0.1

2.3

73.39

42.5

Associated Gene:

Gene:

SLC39A9

Ensembl Gene ID:

ENSAPLG00000004045

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004162

27936132 - 27952120

15989

ENSAPLT00000045513

27937084 - 27956188

19105

ENSAPLT00000036989

27937084 - 27955451

18368