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Intron Name: Anas_platyrhynchos_platyrhynchos_5_2795103_2795200_R


Intron Information:

Intron Rank:
12

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
2795103 - 2795200

Intron Length:
98

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CTT|GTGAGTAAG

5'SS Class:
major

3'SS Sequence:
CCGTACTAAACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TCCTAAT

U12 Branch Point Sequence:
CCGTACTAAACA

Flanking Amino Acid:
ALSSFDSKLACQGKCNCGGP

Intron Amino Acid Position:
505

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
72.3
0.53
1
68.7
37.4

Major BPS
81.9
0.79
0.9
80.1
30

Major PPT
60.1
0.23
1
54.5
39.1

Minor 5ss
32.2
-2
2.8
39.3
40.3

Minor BPS
50.2
0
1.9
59.57
46.3

Associated Gene:

Gene:
TUB

Ensembl Gene ID:

Chromosome:
5

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

2794936 - 2914004
119069

2794936 - 2914004
119069

2794936 - 2914004
119069