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Intron Name: Anas_platyrhynchos_platyrhynchos_5_2796742_2797149_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2796742 - 2797149

Intron Length:

408

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTCCA

5'SS Class:

strong_major

3'SS Sequence:

TTGGTGTGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

GATTGTTAAACT

Flanking Amino Acid:

HERVSIRPRNEHETLLARWQ

Intron Amino Acid Position:

406

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

73.6

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

70.9

0.47

1.1

65.2

45.5

Minor 5ss

36.9

-1.5

2.9

47.3

41.1

Minor BPS

52.6

0.16

2.1

73.5

43.4

Associated Gene:

Gene:

TUB

Ensembl Gene ID:

ENSAPLG00000013637

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038284

2794936 - 2914004

119069

ENSAPLT00000035884

2795193 - 2860153

64961

ENSAPLT00000017248

2795193 - 2908014

112822

ENSAPLT00000014251

2794936 - 2914004

119069

ENSAPLT00000038374

2794936 - 2914004

119069