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Intron Name: Anas_platyrhynchos_platyrhynchos_5_2797249_2801687_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2797249 - 2801687

Intron Length:

4439

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTAAGTACT

5'SS Class:

strong_major

3'SS Sequence:

TAATTACATTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TCTTTTCTAATT

Flanking Amino Acid:

LRQELAAICYETNVLGFKGP

Intron Amino Acid Position:

373

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

86.5

28.5

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

67.1

0.39

64.6

41.4

Minor 5ss

40.8

-1

2.8

57.5

39.6

Minor BPS

0.49

1.6

79.49

37.4

Associated Gene:

Gene:

TUB

Ensembl Gene ID:

ENSAPLG00000013637

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038284

2794936 - 2914004

119069

ENSAPLT00000035884

2795193 - 2860153

64961

ENSAPLT00000017248

2795193 - 2908014

112822

ENSAPLT00000014251

2794936 - 2914004

119069

ENSAPLT00000038374

2794936 - 2914004

119069