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Intron Name: Anas_platyrhynchos_platyrhynchos_5_27976986_27978868_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27976986 - 27978868

Intron Length:

1883

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTGGTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGTACAC

U12 Branch Point Sequence:

GCAGAGTACACT

Flanking Amino Acid:

ELCLQREQKEELERLNQVLE

Intron Amino Acid Position:

186

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.7

1.01

0.7

84.8

25.1

Major BPS

49.5

-0

1.1

58.5

38.2

Major PPT

75.2

0.57

69.2

41.8

Minor 5ss

31.8

-2.1

3.3

42.9

44.7

Minor BPS

32.8

-1.2

2.5

45.67

45.5

Associated Gene:

Gene:

PLEKHD1

Ensembl Gene ID:

ENSAPLG00000004134

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004227

27964338 - 27984831

20494