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Intron Name: Anas_platyrhynchos_platyrhynchos_5_27980822_27981569_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27980822 - 27981569

Intron Length:

748

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAAGTGG

5'SS Class:

major

3'SS Sequence:

TGCCATACACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGGTGAT

U12 Branch Point Sequence:

TTTGCCATACAC

Flanking Amino Acid:

LLEEKLLAEKRMKENEERSR

Intron Amino Acid Position:

308

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.57

59.8

41.6

Major BPS

66.1

0.4

1.3

57.1

49.4

Major PPT

0.25

52.3

41.2

Minor 5ss

-2.3

3.3

37.8

47.1

Minor BPS

48.9

-0.1

2.1

68.53

42.7

Associated Gene:

Gene:

PLEKHD1

Ensembl Gene ID:

ENSAPLG00000004134

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004227

27964338 - 27984831

20494