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Intron Name: Anas_platyrhynchos_platyrhynchos_5_27981703_27982350_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

27981703 - 27982350

Intron Length:

648

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACCACCC

5'SS Class:

major

3'SS Sequence:

TCATCTTCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

TTCTCTTCATCT

Flanking Amino Acid:

EKQQTERDLKAEVKVRMDLE

Intron Amino Acid Position:

353

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.6

0.37

1.2

54.5

43.1

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

78.6

0.64

0.8

76.9

31.5

Minor 5ss

37.7

-1.4

3.3

52.5

44.1

Minor BPS

0.39

1.8

79.81

42.6

Associated Gene:

Gene:

PLEKHD1

Ensembl Gene ID:

ENSAPLG00000004134

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004227

27964338 - 27984831

20494