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Intron Name: Anas_platyrhynchos_platyrhynchos_5_28014759_28020137_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

28014759 - 28020137

Intron Length:

5379

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGGGCG

5'SS Class:

major

3'SS Sequence:

TGTGCATTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

TGATGCTTACTT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

38.5

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

67.6

0.4

0.9

58.8

Minor 5ss

22.7

-3.1

3.4

28.9

43.8

Minor BPS

53.6

0.19

73.32

43.8

Associated Gene:

Gene:

SUSD6

Ensembl Gene ID:

ENSAPLG00000014619

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015244

28014647 - 28090216

75570

ENSAPLT00000023953

28014647 - 28090216

75570