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Intron Name: Anas_platyrhynchos_platyrhynchos_5_28020225_28047830_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

28020225 - 28047830

Intron Length:

27606

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGATGA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTGTTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAACAC

U12 Branch Point Sequence:

TAACACTTACTG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.6

0.96

0.8

77.8

33.3

Major BPS

61.1

0.28

1.1

69.4

35.9

Major PPT

87.2

0.84

0.8

81.2

36.5

Minor 5ss

37.3

-1.4

47.8

47.6

Minor BPS

47.5

-0.3

1.8

52.21

Associated Gene:

Gene:

SUSD6

Ensembl Gene ID:

ENSAPLG00000014619

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023953

28014647 - 28090216

75570

ENSAPLT00000015244

28014647 - 28090216

75570