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Intron Name: Anas_platyrhynchos_platyrhynchos_5_28052407_28081910_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

28052407 - 28081910

Intron Length:

29504

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTGAGTAGA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTGAT

U12 Branch Point Sequence:

TCTGAGATAACC

Flanking Amino Acid:

GWLSKSKGPTYCPQPPQPEN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

76.1

34.8

Major BPS

68.9

0.47

1.2

60.7

45.9

Major PPT

91.8

0.94

0.6

84.7

30.2

Minor 5ss

32.1

-2

2.7

37.9

Minor BPS

43.4

-0.5

2.4

60.01

45.1

Associated Gene:

Gene:

SUSD6

Ensembl Gene ID:

ENSAPLG00000014619

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015244

28014647 - 28090216

75570